Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm20426-201ENSMUST00000173657 440 ntBASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm7848-201ENSMUST00000210739 718 ntBASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm5455-201ENSMUST00000058710 715 ntBASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm7722-201ENSMUST00000120646 741 ntBASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm18038-201ENSMUST00000197900 485 ntBASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh3rf2Q8BZT2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.46□□□□□ -0.42
Sh3rf2Q8BZT2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms