Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Gm43184-201ENSMUST00000197247 542 ntBASIC17.28■□□□□ 0.36
Usp47Q8BY87 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Gm44414-201ENSMUST00000203660 2109 ntBASIC17.28■□□□□ 0.36
Usp47Q8BY87 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Usp47Q8BY87 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp47Q8BY87 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Usp47Q8BY87 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Gm12196-201ENSMUST00000120954 262 ntBASIC17.27■□□□□ 0.35
Usp47Q8BY87 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Gm7848-201ENSMUST00000210739 718 ntBASIC17.27■□□□□ 0.35
Usp47Q8BY87 Gm4157-201ENSMUST00000211647 679 ntBASIC17.27■□□□□ 0.35
Usp47Q8BY87 AC133602.1-201ENSMUST00000227510 509 ntBASIC17.27■□□□□ 0.35
Usp47Q8BY87 AC131330.1-201ENSMUST00000227814 1015 ntBASIC17.27■□□□□ 0.35
Usp47Q8BY87 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp47Q8BY87 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.26■□□□□ 0.35
Usp47Q8BY87 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Gm42748-201ENSMUST00000199354 2341 ntBASIC17.26■□□□□ 0.35
Usp47Q8BY87 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC17.26■□□□□ 0.35
Usp47Q8BY87 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Mir6979-201ENSMUST00000183927 56 ntBASIC17.26■□□□□ 0.35
Usp47Q8BY87 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Ighv4-2-201ENSMUST00000192975 362 ntBASIC17.26■□□□□ 0.35
Usp47Q8BY87 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Gm44136-201ENSMUST00000203819 1106 ntBASIC17.26■□□□□ 0.35
Usp47Q8BY87 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Usp47Q8BY87 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 AC159308.2-201ENSMUST00000213592 2325 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Gm12566-201ENSMUST00000121479 359 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms