Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm12165-201ENSMUST00000117047 342 ntBASIC13.04□□□□□ -0.32
Rd3Q8BRE0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Mir7677-201ENSMUST00000184226 67 ntBASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm37246-201ENSMUST00000192665 835 ntBASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm5369-201ENSMUST00000217499 588 ntBASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm13408-201ENSMUST00000119822 798 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm13935-201ENSMUST00000121859 798 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm10051-201ENSMUST00000145209 414 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm25881-201ENSMUST00000157783 103 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm19353-201ENSMUST00000184561 445 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rd3Q8BRE0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rd3Q8BRE0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Gm12501-201ENSMUST00000119163 529 ntBASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Gm21811-201ENSMUST00000096485 930 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms