Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm15370-201ENSMUST00000117158 253 ntBASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm14723-201ENSMUST00000118686 215 ntBASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpsf4Q8BQZ5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4Q8BQZ5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms