Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Gm15371-201ENSMUST00000117057 784 ntBASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Gm13223-201ENSMUST00000118609 747 ntBASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smco3Q8BQM7 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm14350-201ENSMUST00000116642 640 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm26308-201ENSMUST00000157768 69 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm28760-201ENSMUST00000185995 736 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.12□□□□□ -0.79
Smco3Q8BQM7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smco3Q8BQM7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms