Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm13875-201ENSMUST00000120162 282 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm43822-201ENSMUST00000200285 476 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm6334-201ENSMUST00000207083 228 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm45865-201ENSMUST00000211815 945 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm21769-201ENSMUST00000211922 111 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Cts7-204ENSMUST00000225321 1257 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Gm10076-201ENSMUST00000073238 384 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Olfr582-201ENSMUST00000098212 960 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sfr1Q8BP27 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Gm14723-201ENSMUST00000118686 215 ntBASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Gm5950-201ENSMUST00000213337 772 ntBASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.59□□□□□ -0.39
Sfr1Q8BP27 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sfr1Q8BP27 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sfr1Q8BP27 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms