Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm12384-201ENSMUST00000119228 919 ntBASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Gm9022-201ENSMUST00000182482 992 ntBASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2bQ8BJF9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Gm9002-201ENSMUST00000178437 499 ntBASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.6□□□□□ -0.39
Chmp2bQ8BJF9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms