Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Mir1894-201ENSMUST00000122802 81 ntBASIC12□□□□□ -0.49
Smndc1Q8BGT7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Gm17150-201ENSMUST00000165577 381 ntBASIC12□□□□□ -0.49
Smndc1Q8BGT7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Gm6244-201ENSMUST00000178732 841 ntBASIC12□□□□□ -0.49
Smndc1Q8BGT7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smndc1Q8BGT7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm12928-201ENSMUST00000117115 573 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm13689-201ENSMUST00000119360 685 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm28196-201ENSMUST00000187719 640 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm18062-201ENSMUST00000208020 547 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm18055-201ENSMUST00000208254 547 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smndc1Q8BGT7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smndc1Q8BGT7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smndc1Q8BGT7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Smndc1Q8BGT7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms