Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Samm50Q8BGH2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Samm50Q8BGH2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm27501-201ENSMUST00000183599 107 ntBASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm27390-201ENSMUST00000184516 176 ntBASIC14.43□□□□□ -0.1
Samm50Q8BGH2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.43□□□□□ -0.1
Samm50Q8BGH2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm43179-201ENSMUST00000198797 275 ntBASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm18935-201ENSMUST00000212692 664 ntBASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Samm50Q8BGH2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Rubie-203ENSMUST00000227803 2430 ntBASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Snord83b-201ENSMUST00000104546 94 ntBASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Gm27516-201ENSMUST00000184237 98 ntBASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Gm5904-201ENSMUST00000210286 865 ntBASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Samm50Q8BGH2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Gm14760-201ENSMUST00000121831 999 ntBASIC14.41□□□□□ -0.1
Samm50Q8BGH2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Gm29396-201ENSMUST00000185659 716 ntBASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Gm38266-201ENSMUST00000194931 421 ntBASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms