Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.17□□□□□ -0.3
Trim65Q8BFW4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim65Q8BFW4 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm24830-201ENSMUST00000102024 166 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm24934-201ENSMUST00000103764 111 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm14832-201ENSMUST00000121289 322 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm24845-201ENSMUST00000158034 109 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm26232-201ENSMUST00000083360 166 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim65Q8BFW4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim65Q8BFW4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms