Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gm45224-201ENSMUST00000208203 414 ntBASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh19Q80TF3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm29615-201ENSMUST00000185371 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm28224-201ENSMUST00000186078 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm29001-201ENSMUST00000186177 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm28292-201ENSMUST00000186593 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm28101-201ENSMUST00000187608 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm29076-201ENSMUST00000187689 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm28302-201ENSMUST00000187931 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm28646-201ENSMUST00000188220 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm28205-201ENSMUST00000189177 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm29032-201ENSMUST00000189797 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm28695-201ENSMUST00000190300 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm37448-201ENSMUST00000192795 697 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms