Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 CT009754.4-201ENSMUST00000221430 565 ntBASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Ntng1-201ENSMUST00000051253 327 ntBASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm45550-201ENSMUST00000209380 946 ntBASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf38bQ80SY5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Prpf38bQ80SY5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Gm25880-201ENSMUST00000104331 132 ntBASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Gm9358-201ENSMUST00000183067 927 ntBASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Gm19931-201ENSMUST00000198920 368 ntBASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Gm45433-201ENSMUST00000209386 247 ntBASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Gm8913-201ENSMUST00000209491 641 ntBASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms