Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.82□□□□□ -0.36
Cspg5Q71M36 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cspg5Q71M36 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm24749-201ENSMUST00000157838 343 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm3508-201ENSMUST00000186012 792 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm8913-201ENSMUST00000209491 641 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.81□□□□□ -0.36
Cspg5Q71M36 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.81□□□□□ -0.36
Cspg5Q71M36 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm13296-201ENSMUST00000117854 997 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm44126-201ENSMUST00000204831 514 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm45433-201ENSMUST00000209386 247 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm10312-201ENSMUST00000078515 489 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms