Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm24255-201ENSMUST00000104481 128 ntBASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm12058-201ENSMUST00000118614 437 ntBASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm42937-201ENSMUST00000197360 752 ntBASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm10076-201ENSMUST00000073238 384 ntBASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc2Q6PDG5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Gm11531-201ENSMUST00000117614 555 ntBASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Gm27320-201ENSMUST00000184892 109 ntBASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Gm44958-201ENSMUST00000203734 736 ntBASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Gm5950-201ENSMUST00000213337 772 ntBASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms