Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm12058-201ENSMUST00000118614 437 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm4034-201ENSMUST00000187674 480 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sp140Q6NSQ5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm4986-201ENSMUST00000119731 549 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm37424-201ENSMUST00000191727 561 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm37201-201ENSMUST00000191845 523 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm38002-201ENSMUST00000193255 180 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm42599-201ENSMUST00000201308 469 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms