Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.53□□□□□ -0.08
Ctr9Q62018 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ctr9Q62018 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm37466-201ENSMUST00000195692 652 ntBASIC14.53□□□□□ -0.08
Ctr9Q62018 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.53□□□□□ -0.08
Ctr9Q62018 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.53□□□□□ -0.08
Ctr9Q62018 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctr9Q62018 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ctr9Q62018 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ctr9Q62018 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ctr9Q62018 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.52□□□□□ -0.08
Ctr9Q62018 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ctr9Q62018 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctr9Q62018 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Gm7003-201ENSMUST00000195089 312 ntBASIC14.52□□□□□ -0.09
Ctr9Q62018 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Gm18212-201ENSMUST00000211678 889 ntBASIC14.52□□□□□ -0.09
Ctr9Q62018 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ctr9Q62018 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctr9Q62018 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms