Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gli3Q61602 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Gm14006-201ENSMUST00000122132 981 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gli3Q61602 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gli3Q61602 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gli3Q61602 Gm12912-201ENSMUST00000121596 1381 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gli3Q61602 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gli3Q61602 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.13■□□□□ 0.17
Gli3Q61602 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Gli3Q61602 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.13■□□□□ 0.17
Gli3Q61602 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Mir453-201ENSMUST00000104732 82 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Gm11736-201ENSMUST00000121468 505 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gli3Q61602 Gm43811-201ENSMUST00000202862 695 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC16.13■□□□□ 0.17
Gli3Q61602 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC16.13■□□□□ 0.17
Gli3Q61602 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gli3Q61602 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC16.13■□□□□ 0.17
Gli3Q61602 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.12■□□□□ 0.17
Gli3Q61602 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gli3Q61602 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gli3Q61602 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Gm22344-201ENSMUST00000122642 278 ntBASIC16.12■□□□□ 0.17
Gli3Q61602 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gli3Q61602 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC16.12■□□□□ 0.17
Gli3Q61602 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC16.12■□□□□ 0.17
Gli3Q61602 AC174797.2-201ENSMUST00000225835 165 ntBASIC16.12■□□□□ 0.17
Gli3Q61602 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gli3Q61602 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gli3Q61602 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC16.12■□□□□ 0.17
Gli3Q61602 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gli3Q61602 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.11■□□□□ 0.17
Gli3Q61602 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Gm1826-201ENSMUST00000118646 1162 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Gm15374-201ENSMUST00000119313 844 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Gm11993-201ENSMUST00000121861 820 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Gli3Q61602 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gli3Q61602 Gm21778-201ENSMUST00000178779 471 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Gm7765-201ENSMUST00000182585 974 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC16.11■□□□□ 0.17
Gli3Q61602 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC16.11■□□□□ 0.17
Gli3Q61602 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 Gm7183-201ENSMUST00000213870 1005 ntBASIC16.11■□□□□ 0.17
Gli3Q61602 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC16.11■□□□□ 0.17
Gli3Q61602 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms