Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.79□□□□□ -0.04
Mre11Q61216 Gm36991-201ENSMUST00000191800 648 ntBASIC14.79□□□□□ -0.04
Mre11Q61216 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.79□□□□□ -0.04
Mre11Q61216 Gm45071-201ENSMUST00000205353 571 ntBASIC14.79□□□□□ -0.04
Mre11Q61216 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
Mre11Q61216 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.79□□□□□ -0.04
Mre11Q61216 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Mre11Q61216 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Mre11Q61216 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Gm45532-201ENSMUST00000210342 3620 ntBASIC14.79□□□□□ -0.04
Mre11Q61216 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Mre11Q61216 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mre11Q61216 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.78□□□□□ -0.04
Mre11Q61216 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Mre11Q61216 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.78□□□□□ -0.04
Mre11Q61216 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.78□□□□□ -0.04
Mre11Q61216 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Mre11Q61216 Gm38294-201ENSMUST00000192831 381 ntBASIC14.78□□□□□ -0.04
Mre11Q61216 Gm38223-201ENSMUST00000194484 695 ntBASIC14.78□□□□□ -0.04
Mre11Q61216 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.78□□□□□ -0.04
Mre11Q61216 Gm5279-201ENSMUST00000199575 745 ntBASIC14.78□□□□□ -0.04
Mre11Q61216 Gm44872-201ENSMUST00000207864 420 ntBASIC14.78□□□□□ -0.04
Mre11Q61216 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC14.78□□□□□ -0.04
Mre11Q61216 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Mre11Q61216 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.78□□□□□ -0.04
Mre11Q61216 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mre11Q61216 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Mre11Q61216 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Mre11Q61216 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Mre11Q61216 Cog3-203ENSMUST00000227473 4197 ntBASIC14.77□□□□□ -0.04
Mre11Q61216 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mre11Q61216 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Gm14767-201ENSMUST00000121559 586 ntBASIC14.77□□□□□ -0.05
Mre11Q61216 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.77□□□□□ -0.05
Mre11Q61216 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Mre11Q61216 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Mre11Q61216 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Gm28693-202ENSMUST00000190758 331 ntBASIC14.77□□□□□ -0.05
Mre11Q61216 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.77□□□□□ -0.05
Mre11Q61216 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.77□□□□□ -0.05
Mre11Q61216 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.77□□□□□ -0.05
Mre11Q61216 Gm45574-201ENSMUST00000210921 331 ntBASIC14.77□□□□□ -0.05
Mre11Q61216 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.77□□□□□ -0.05
Mre11Q61216 Gm5186-201ENSMUST00000218781 920 ntBASIC14.77□□□□□ -0.05
Mre11Q61216 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.77□□□□□ -0.05
Mre11Q61216 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Mre11Q61216 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.77□□□□□ -0.05
Mre11Q61216 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Mre11Q61216 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Mre11Q61216 Gm9466-201ENSMUST00000218144 2246 ntBASIC14.77□□□□□ -0.05
Mre11Q61216 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mre11Q61216 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms