Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Gm7722-201ENSMUST00000120646 741 ntBASIC14.75□□□□□ -0.05
Vps54Q5SPW0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps54Q5SPW0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Gm2260-201ENSMUST00000184965 657 ntBASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps54Q5SPW0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Gm4034-201ENSMUST00000187674 480 ntBASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps54Q5SPW0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms