Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gm13035-201ENSMUST00000117496 342 ntBASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gm17827-201ENSMUST00000211825 742 ntBASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gm45706-201ENSMUST00000213063 2136 ntBASIC21.39■■□□□ 1.01
Trim41Q5NCC3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Olfr1347-205ENSMUST00000220413 964 ntBASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Gm38042-201ENSMUST00000191614 5208 ntBASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim41Q5NCC3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Gm5525-201ENSMUST00000190438 1312 ntBASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Gm43364-201ENSMUST00000196046 3274 ntBASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim41Q5NCC3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm15573-201ENSMUST00000119487 540 ntBASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm4879-201ENSMUST00000122190 1272 ntBASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm13182-201ENSMUST00000122241 312 ntBASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm4868-201ENSMUST00000164138 789 ntBASIC21.36■■□□□ 1.01
Trim41Q5NCC3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm28745-201ENSMUST00000190069 305 ntBASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm7904-201ENSMUST00000217049 465 ntBASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim41Q5NCC3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Mir7677-201ENSMUST00000184226 67 ntBASIC21.35■■□□□ 1.01
Trim41Q5NCC3 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC21.35■■□□□ 1.01
Trim41Q5NCC3 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 AC164087.2-201ENSMUST00000216206 1072 ntBASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 159.4 ms