Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm43377-201ENSMUST00000201640 455 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm17040-202ENSMUST00000170597 889 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm43962-201ENSMUST00000203898 190 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm5455-201ENSMUST00000058710 715 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h1Q4VGL6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Gm6546-201ENSMUST00000192096 766 ntBASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Gm43138-201ENSMUST00000199123 708 ntBASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 AU022133-201ENSMUST00000200601 873 ntBASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Gm18730-201ENSMUST00000218038 343 ntBASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h1Q4VGL6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms