Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf44Q3UHJ8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm14109-201ENSMUST00000118814 309 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm27046-201ENSMUST00000182160 463 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm27320-201ENSMUST00000184892 109 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm19994-201ENSMUST00000217086 586 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm10312-201ENSMUST00000078515 489 ntBASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf44Q3UHJ8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms