Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm13094-201ENSMUST00000117930 409 ntBASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Gm23439-201ENSMUST00000104292 132 ntBASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Gm15207-201ENSMUST00000119259 442 ntBASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Gm15196-201ENSMUST00000121406 482 ntBASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Gm37981-201ENSMUST00000194280 535 ntBASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Spg11Q3UHA3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Gm23119-201ENSMUST00000158610 140 ntBASIC11.27□□□□□ -0.61
Spg11Q3UHA3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Gm33707-201ENSMUST00000195135 569 ntBASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Spg11Q3UHA3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm12274-201ENSMUST00000120062 385 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm13981-201ENSMUST00000122360 447 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm22763-201ENSMUST00000158374 107 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm9022-201ENSMUST00000182482 992 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm8342-201ENSMUST00000209839 757 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm15707-201ENSMUST00000118804 996 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Gm43671-201ENSMUST00000200422 433 ntBASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Spg11Q3UHA3 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms