Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Klf10-203ENSMUST00000227920 2144 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm43965-201ENSMUST00000203779 789 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 CU025215.1-201ENSMUST00000222986 603 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm5159-201ENSMUST00000212733 1652 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm7741-201ENSMUST00000181445 989 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm37284-201ENSMUST00000193607 539 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 CT030035.1-201ENSMUST00000223964 935 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 n-R5s130-201ENSMUST00000178128 119 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm24312-201ENSMUST00000178677 119 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 n-R5s106-201ENSMUST00000179060 119 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 n-R5s118-201ENSMUST00000179887 119 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm6098-201ENSMUST00000180234 330 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm4866-201ENSMUST00000197408 589 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 AC122035.1-201ENSMUST00000227576 1016 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm10015-201ENSMUST00000072570 465 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm22341-201ENSMUST00000083775 129 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm42651-201ENSMUST00000199851 1339 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm24161-201ENSMUST00000104592 130 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Gm42441-201ENSMUST00000199778 748 ntBASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Ush2AQ2QI47 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm9867-201ENSMUST00000192212 2647 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm37348-201ENSMUST00000193104 1789 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm5873-201ENSMUST00000177157 1066 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm44304-201ENSMUST00000200509 145 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 AC164437.3-201ENSMUST00000228323 347 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm5740-201ENSMUST00000211003 1857 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms