Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AC153153.1-201ENSMUST00000225803 793 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Cacna2d3-208ENSMUST00000225985 918 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm16477-201ENSMUST00000085365 801 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm17415-201ENSMUST00000096427 789 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col17a1Q07563 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col17a1Q07563 AC238940.1-201ENSMUST00000225106 1858 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 AC164702.1-201ENSMUST00000220135 2212 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC18.47■□□□□ 0.55
Col17a1Q07563 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Zfp419-201ENSMUST00000173446 916 ntBASIC18.46■□□□□ 0.55
Col17a1Q07563 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 Gm7940-201ENSMUST00000218195 769 ntBASIC18.46■□□□□ 0.55
Col17a1Q07563 Gm5040-201ENSMUST00000218609 800 ntBASIC18.46■□□□□ 0.55
Col17a1Q07563 Gm7727-201ENSMUST00000219830 671 ntBASIC18.46■□□□□ 0.55
Col17a1Q07563 AC124356.1-201ENSMUST00000221469 698 ntBASIC18.46■□□□□ 0.55
Col17a1Q07563 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Gm37269-201ENSMUST00000193906 1891 ntBASIC18.46■□□□□ 0.55
Col17a1Q07563 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col17a1Q07563 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.46■□□□□ 0.55
Col17a1Q07563 Gm13426-201ENSMUST00000117887 795 ntBASIC18.46■□□□□ 0.54
Col17a1Q07563 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC18.46■□□□□ 0.54
Col17a1Q07563 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC18.46■□□□□ 0.54
Col17a1Q07563 Gm27440-201ENSMUST00000184785 107 ntBASIC18.46■□□□□ 0.54
Col17a1Q07563 Gm17825-201ENSMUST00000206836 794 ntBASIC18.46■□□□□ 0.54
Col17a1Q07563 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col17a1Q07563 Gm5468-202ENSMUST00000227851 682 ntBASIC18.46■□□□□ 0.54
Col17a1Q07563 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col17a1Q07563 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC18.46■□□□□ 0.54
Col17a1Q07563 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC18.45■□□□□ 0.54
Col17a1Q07563 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm5989-201ENSMUST00000096092 2077 ntBASIC18.45■□□□□ 0.54
Col17a1Q07563 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Col17a1Q07563 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col17a1Q07563 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm23129-201ENSMUST00000104259 132 ntBASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm12774-201ENSMUST00000117881 416 ntBASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm12072-201ENSMUST00000118293 715 ntBASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm7833-201ENSMUST00000183288 990 ntBASIC18.45■□□□□ 0.54
Col17a1Q07563 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC18.45■□□□□ 0.54
Col17a1Q07563 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col17a1Q07563 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col17a1Q07563 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col17a1Q07563 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col17a1Q07563 AC126257.1-201ENSMUST00000213195 1536 ntBASIC18.44■□□□□ 0.54
Col17a1Q07563 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col17a1Q07563 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col17a1Q07563 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Col17a1Q07563 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col17a1Q07563 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC18.44■□□□□ 0.54
Col17a1Q07563 H2afy3-201ENSMUST00000151919 1112 ntBASIC18.44■□□□□ 0.54
Col17a1Q07563 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC18.44■□□□□ 0.54
Col17a1Q07563 Mir6387-201ENSMUST00000184042 108 ntBASIC18.44■□□□□ 0.54
Col17a1Q07563 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC18.44■□□□□ 0.54
Col17a1Q07563 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms