Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm27530-201ENSMUST00000184096 98 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.94□□□□□ -0.18
GabpaQ00422 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm45118-201ENSMUST00000208928 825 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
GabpaQ00422 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm11509-201ENSMUST00000117358 325 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm7851-201ENSMUST00000117574 323 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm11511-201ENSMUST00000118146 540 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm13611-201ENSMUST00000118269 318 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm14247-201ENSMUST00000120950 237 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm25881-201ENSMUST00000157783 103 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm8343-201ENSMUST00000182705 994 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm3332-201ENSMUST00000189337 928 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.93□□□□□ -0.18
GabpaQ00422 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm4482-201ENSMUST00000200876 742 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 Gm26448-201ENSMUST00000082446 203 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.93□□□□□ -0.18
GabpaQ00422 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
GabpaQ00422 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
GabpaQ00422 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GabpaQ00422 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GabpaQ00422 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.92□□□□□ -0.18
GabpaQ00422 Gm23251-201ENSMUST00000103773 110 ntBASIC13.92□□□□□ -0.18
GabpaQ00422 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
GabpaQ00422 Mir1943-201ENSMUST00000158276 73 ntBASIC13.92□□□□□ -0.18
GabpaQ00422 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GabpaQ00422 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.92□□□□□ -0.18
GabpaQ00422 Gm5733-201ENSMUST00000190232 939 ntBASIC13.92□□□□□ -0.18
GabpaQ00422 Gm44882-201ENSMUST00000205702 802 ntBASIC13.92□□□□□ -0.18
GabpaQ00422 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.92□□□□□ -0.18
GabpaQ00422 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GabpaQ00422 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.92□□□□□ -0.18
GabpaQ00422 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GabpaQ00422 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms