Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.49□□□□□ -0.41
Gabpb1Q00420 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.49□□□□□ -0.41
Gabpb1Q00420 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm23912-201ENSMUST00000104687 87 ntBASIC12.49□□□□□ -0.41
Gabpb1Q00420 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm27572-201ENSMUST00000183702 255 ntBASIC12.49□□□□□ -0.41
Gabpb1Q00420 Gm28882-201ENSMUST00000185504 314 ntBASIC12.49□□□□□ -0.41
Gabpb1Q00420 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.49□□□□□ -0.41
Gabpb1Q00420 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.49□□□□□ -0.41
Gabpb1Q00420 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.48□□□□□ -0.41
Gabpb1Q00420 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms