Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.53□□□□□ -0.72
Smn1P97801 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.53□□□□□ -0.72
Smn1P97801 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.53□□□□□ -0.72
Smn1P97801 Gm10156-201ENSMUST00000122364 462 ntBASIC10.53□□□□□ -0.72
Smn1P97801 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.53□□□□□ -0.72
Smn1P97801 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Smn1P97801 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smn1P97801 Gm8810-201ENSMUST00000172895 754 ntBASIC10.53□□□□□ -0.72
Smn1P97801 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Smn1P97801 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.53□□□□□ -0.72
Smn1P97801 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smn1P97801 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.53□□□□□ -0.72
Smn1P97801 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Smn1P97801 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Smn1P97801 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.53□□□□□ -0.72
Smn1P97801 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.53□□□□□ -0.72
Smn1P97801 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smn1P97801 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smn1P97801 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smn1P97801 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Smn1P97801 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Smn1P97801 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smn1P97801 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smn1P97801 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smn1P97801 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.52□□□□□ -0.72
Smn1P97801 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.52□□□□□ -0.72
Smn1P97801 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smn1P97801 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smn1P97801 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.52□□□□□ -0.73
Smn1P97801 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.52□□□□□ -0.73
Smn1P97801 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Gm8213-201ENSMUST00000118191 441 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Gm12203-201ENSMUST00000118235 598 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Gm15920-201ENSMUST00000118998 402 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Gm12384-201ENSMUST00000119228 919 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Gm12209-201ENSMUST00000120089 596 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Gm11637-201ENSMUST00000120601 592 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Gm2231-201ENSMUST00000125661 612 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.52□□□□□ -0.73
Smn1P97801 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Smn1P97801 Gm9022-201ENSMUST00000182482 992 ntBASIC10.52□□□□□ -0.73
Smn1P97801 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Smn1P97801 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.52□□□□□ -0.73
Smn1P97801 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 AC073947.1-201ENSMUST00000216991 649 ntBASIC10.52□□□□□ -0.73
Smn1P97801 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Gm10146-201ENSMUST00000072739 309 ntBASIC10.52□□□□□ -0.73
Smn1P97801 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Smn1P97801 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smn1P97801 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smn1P97801 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smn1P97801 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smn1P97801 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smn1P97801 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms