Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm7851-201ENSMUST00000117574 323 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm13809-201ENSMUST00000117921 597 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm12036-201ENSMUST00000120008 530 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm18304-201ENSMUST00000189162 546 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm11989-201ENSMUST00000117240 672 ntBASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm11362-201ENSMUST00000118838 850 ntBASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm15573-201ENSMUST00000119487 540 ntBASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.37□□□□□ -0.59
Cacna1aP97445 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cacna1aP97445 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cacna1aP97445 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Cacna1aP97445 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm17831-201ENSMUST00000205579 900 ntBASIC11.36□□□□□ -0.59
Cacna1aP97445 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.36□□□□□ -0.59
Cacna1aP97445 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.36□□□□□ -0.59
Cacna1aP97445 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm15036-201ENSMUST00000118880 400 ntBASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm18463-201ENSMUST00000207258 474 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms