Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm15566-201ENSMUST00000121130 590 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm44329-201ENSMUST00000197469 112 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Map1b-203ENSMUST00000223725 2669 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx2-3P97334 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.38■□□□□ 0.05
Nkx2-3P97334 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm13263-201ENSMUST00000121271 838 ntBASIC15.37■□□□□ 0.05
Nkx2-3P97334 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm4034-201ENSMUST00000187674 480 ntBASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm37458-201ENSMUST00000194055 410 ntBASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm37905-201ENSMUST00000195310 341 ntBASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm5714-201ENSMUST00000197343 566 ntBASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm17931-201ENSMUST00000208132 634 ntBASIC15.37■□□□□ 0.05
Nkx2-3P97334 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-3P97334 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm15352-201ENSMUST00000118696 270 ntBASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.36■□□□□ 0.05
Nkx2-3P97334 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms