Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim43cP86449 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43cP86449 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Trim43cP86449 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim43cP86449 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Gm12015-201ENSMUST00000117065 843 ntBASIC13.38□□□□□ -0.27
Trim43cP86449 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43cP86449 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Rprl1-201ENSMUST00000158050 327 ntBASIC13.38□□□□□ -0.27
Trim43cP86449 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43cP86449 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Gm37259-201ENSMUST00000193903 849 ntBASIC13.38□□□□□ -0.27
Trim43cP86449 Gm43758-201ENSMUST00000199500 367 ntBASIC13.38□□□□□ -0.27
Trim43cP86449 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim43cP86449 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim43cP86449 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.38□□□□□ -0.27
Trim43cP86449 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim43cP86449 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.38□□□□□ -0.27
Trim43cP86449 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim43cP86449 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43cP86449 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim43cP86449 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Gm24255-201ENSMUST00000104481 128 ntBASIC13.37□□□□□ -0.27
Trim43cP86449 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.37□□□□□ -0.27
Trim43cP86449 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim43cP86449 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.37□□□□□ -0.27
Trim43cP86449 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43cP86449 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43cP86449 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms