Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SgcbP82349 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SgcbP82349 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
SgcbP82349 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SgcbP82349 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.01□□□□□ -0.65
SgcbP82349 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.01□□□□□ -0.65
SgcbP82349 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.01□□□□□ -0.65
SgcbP82349 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gm44958-201ENSMUST00000203734 736 ntBASIC11.01□□□□□ -0.65
SgcbP82349 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.01□□□□□ -0.65
SgcbP82349 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
SgcbP82349 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.01□□□□□ -0.65
SgcbP82349 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.01□□□□□ -0.65
SgcbP82349 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcbP82349 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11□□□□□ -0.65
SgcbP82349 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11□□□□□ -0.65
SgcbP82349 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11□□□□□ -0.65
SgcbP82349 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SgcbP82349 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11□□□□□ -0.65
SgcbP82349 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11□□□□□ -0.65
SgcbP82349 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
SgcbP82349 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Gm26083-201ENSMUST00000157904 193 ntBASIC11□□□□□ -0.65
SgcbP82349 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Gm6082-201ENSMUST00000215204 454 ntBASIC11□□□□□ -0.65
SgcbP82349 Gm18615-201ENSMUST00000222919 1031 ntBASIC11□□□□□ -0.65
SgcbP82349 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11□□□□□ -0.65
SgcbP82349 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
SgcbP82349 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcbP82349 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SgcbP82349 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11□□□□□ -0.65
SgcbP82349 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcbP82349 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
SgcbP82349 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcbP82349 Gm18227-201ENSMUST00000211082 1468 ntBASIC11□□□□□ -0.65
SgcbP82349 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcbP82349 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SgcbP82349 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcbP82349 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcbP82349 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcbP82349 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SgcbP82349 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms