Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gm27731-201ENSMUST00000185192 107 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SgcdP82347 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SgcdP82347 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SgcdP82347 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SgcdP82347 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SgcdP82347 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.46□□□□□ -0.57
SgcdP82347 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.46□□□□□ -0.57
SgcdP82347 Gm15429-201ENSMUST00000151268 798 ntBASIC11.46□□□□□ -0.57
SgcdP82347 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.46□□□□□ -0.57
SgcdP82347 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcdP82347 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.46□□□□□ -0.58
SgcdP82347 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SgcdP82347 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SgcdP82347 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SgcdP82347 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcdP82347 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.45□□□□□ -0.58
SgcdP82347 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.45□□□□□ -0.58
SgcdP82347 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.45□□□□□ -0.58
SgcdP82347 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Mir1247-201ENSMUST00000116706 82 ntBASIC11.45□□□□□ -0.58
SgcdP82347 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.45□□□□□ -0.58
SgcdP82347 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
SgcdP82347 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.45□□□□□ -0.58
SgcdP82347 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SgcdP82347 Gm27572-201ENSMUST00000183702 255 ntBASIC11.45□□□□□ -0.58
SgcdP82347 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.45□□□□□ -0.58
SgcdP82347 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.45□□□□□ -0.58
SgcdP82347 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.45□□□□□ -0.58
SgcdP82347 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SgcdP82347 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms