Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CiitaP79621 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CiitaP79621 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CiitaP79621 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CiitaP79621 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
CiitaP79621 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CiitaP79621 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CiitaP79621 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CiitaP79621 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.33□□□□□ -0.28
CiitaP79621 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.33□□□□□ -0.28
CiitaP79621 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
CiitaP79621 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.33□□□□□ -0.28
CiitaP79621 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Gm23912-201ENSMUST00000104687 87 ntBASIC13.33□□□□□ -0.28
CiitaP79621 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.33□□□□□ -0.28
CiitaP79621 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.33□□□□□ -0.28
CiitaP79621 Gm14247-201ENSMUST00000120950 237 ntBASIC13.33□□□□□ -0.28
CiitaP79621 Mir5120-201ENSMUST00000175020 78 ntBASIC13.33□□□□□ -0.28
CiitaP79621 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CiitaP79621 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CiitaP79621 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
CiitaP79621 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CiitaP79621 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CiitaP79621 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CiitaP79621 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
CiitaP79621 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CiitaP79621 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CiitaP79621 Gm12164-201ENSMUST00000121695 551 ntBASIC13.32□□□□□ -0.28
CiitaP79621 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.32□□□□□ -0.28
CiitaP79621 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.32□□□□□ -0.28
CiitaP79621 Gm27627-201ENSMUST00000183644 150 ntBASIC13.32□□□□□ -0.28
CiitaP79621 Gm28450-201ENSMUST00000187349 638 ntBASIC13.32□□□□□ -0.28
CiitaP79621 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.32□□□□□ -0.28
CiitaP79621 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.32□□□□□ -0.28
CiitaP79621 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CiitaP79621 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CiitaP79621 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CiitaP79621 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CiitaP79621 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms