Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Lhx1P63006 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx1P63006 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Lhx1P63006 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.1□□□□□ -0.47
Lhx1P63006 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx1P63006 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Rprl1-201ENSMUST00000158050 327 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.09□□□□□ -0.47
Lhx1P63006 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Gm27627-201ENSMUST00000183644 150 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Gm29615-201ENSMUST00000185371 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm28224-201ENSMUST00000186078 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm29001-201ENSMUST00000186177 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm28292-201ENSMUST00000186593 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm28101-201ENSMUST00000187608 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm29076-201ENSMUST00000187689 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm28302-201ENSMUST00000187931 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm28646-201ENSMUST00000188220 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm28205-201ENSMUST00000189177 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm29032-201ENSMUST00000189797 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm28695-201ENSMUST00000190300 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Gm37448-201ENSMUST00000192795 697 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.09□□□□□ -0.47
Lhx1P63006 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.09□□□□□ -0.47
Lhx1P63006 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lhx1P63006 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx1P63006 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Lhx1P63006 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Lhx1P63006 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Lhx1P63006 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lhx1P63006 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Lhx1P63006 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Lhx1P63006 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lhx1P63006 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.08□□□□□ -0.48
Lhx1P63006 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lhx1P63006 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Lhx1P63006 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lhx1P63006 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lhx1P63006 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.08□□□□□ -0.48
Lhx1P63006 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Gm11439-201ENSMUST00000118598 409 ntBASIC12.08□□□□□ -0.48
Lhx1P63006 Gm14277-201ENSMUST00000121195 360 ntBASIC12.08□□□□□ -0.48
Lhx1P63006 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.08□□□□□ -0.48
Lhx1P63006 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx1P63006 Gm24990-201ENSMUST00000157406 323 ntBASIC12.08□□□□□ -0.48
Lhx1P63006 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms