Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rps28P62858 Rtp1-201ENSMUST00000038730 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rps28P62858 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rps28P62858 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rps28P62858 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 AC167022.1-201ENSMUST00000218647 1458 ntBASIC7.04□□□□□ -1.28
Rps28P62858 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Nedd4l-211ENSMUST00000226058 3393 ntBASIC7.04□□□□□ -1.28
Rps28P62858 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC7.04□□□□□ -1.28
Rps28P62858 Gm45354-201ENSMUST00000199820 2557 ntBASIC7.04□□□□□ -1.28
Rps28P62858 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Rps28P62858 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Gm13326-201ENSMUST00000118730 1011 ntBASIC7.04□□□□□ -1.28
Rps28P62858 Gm7638-201ENSMUST00000121348 967 ntBASIC7.04□□□□□ -1.28
Rps28P62858 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC7.04□□□□□ -1.28
Rps28P62858 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC7.04□□□□□ -1.28
Rps28P62858 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC7.04□□□□□ -1.28
Rps28P62858 Gm44549-201ENSMUST00000208351 577 ntBASIC7.04□□□□□ -1.28
Rps28P62858 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Rps28P62858 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Gm35618-201ENSMUST00000223164 1606 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Rps28P62858 Nnt-206ENSMUST00000223268 3339 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Rufy4-201ENSMUST00000080167 2306 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Gm37978-201ENSMUST00000194736 2915 ntBASIC7.04□□□□□ -1.28
Rps28P62858 Acot11-201ENSMUST00000065253 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rps28P62858 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Gm37304-201ENSMUST00000193833 2886 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Serping1-202ENSMUST00000111641 1665 ntTSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Psat1-201ENSMUST00000025542 2617 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Rps28P62858 3930402G23Rik-201ENSMUST00000040608 3086 ntTSL 2 BASIC7.03□□□□□ -1.28
Rps28P62858 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Tfrc-202ENSMUST00000120680 1860 ntTSL 2 BASIC7.03□□□□□ -1.28
Rps28P62858 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Rps28P62858 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Gm21817-201ENSMUST00000178584 2583 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Lrp1b-207ENSMUST00000142688 2911 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms