Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.35□□□□□ -0.75
Gabra1P62812 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.35□□□□□ -0.75
Gabra1P62812 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.35□□□□□ -0.75
Gabra1P62812 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.35□□□□□ -0.75
Gabra1P62812 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.35□□□□□ -0.75
Gabra1P62812 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Gabra1P62812 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.35□□□□□ -0.75
Gabra1P62812 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gabra1P62812 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.35□□□□□ -0.75
Gabra1P62812 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Cog3-203ENSMUST00000227473 4197 ntBASIC10.34□□□□□ -0.75
Gabra1P62812 Gm14350-201ENSMUST00000116642 640 ntBASIC10.34□□□□□ -0.75
Gabra1P62812 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Gabra1P62812 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Gm44069-201ENSMUST00000204898 506 ntBASIC10.34□□□□□ -0.75
Gabra1P62812 Gm44872-201ENSMUST00000207864 420 ntBASIC10.34□□□□□ -0.75
Gabra1P62812 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.34□□□□□ -0.75
Gabra1P62812 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Gm9797-201ENSMUST00000052902 613 ntBASIC10.34□□□□□ -0.75
Gabra1P62812 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Mir339-201ENSMUST00000083659 96 ntBASIC10.34□□□□□ -0.75
Gabra1P62812 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Gabra1P62812 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Gabra1P62812 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Gabra1P62812 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gabra1P62812 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gabra1P62812 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Gabra1P62812 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Gabra1P62812 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms