Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.93□□□□□ -0.66
Sf3b6P59708 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.93□□□□□ -0.66
Sf3b6P59708 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.93□□□□□ -0.66
Sf3b6P59708 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm6244-201ENSMUST00000178732 841 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm4034-201ENSMUST00000187674 480 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm2495-201ENSMUST00000191160 466 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm37042-201ENSMUST00000193816 581 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm18187-201ENSMUST00000196476 984 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.92□□□□□ -0.66
Sf3b6P59708 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sf3b6P59708 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.92□□□□□ -0.66
Sf3b6P59708 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm16479-201ENSMUST00000121706 932 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms