Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.52■□□□□ 0.08
Msh6P54276 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.52■□□□□ 0.08
Msh6P54276 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.52■□□□□ 0.07
Msh6P54276 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Msh6P54276 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh6P54276 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Msh6P54276 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.52■□□□□ 0.07
Msh6P54276 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.52■□□□□ 0.07
Msh6P54276 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh6P54276 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Msh6P54276 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh6P54276 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Msh6P54276 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh6P54276 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.51■□□□□ 0.07
Msh6P54276 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Gm26286-201ENSMUST00000104166 134 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Msh6P54276 Gm15595-201ENSMUST00000120840 961 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.51■□□□□ 0.07
Msh6P54276 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Msh6P54276 Gm6407-201ENSMUST00000176468 549 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Gm9358-201ENSMUST00000183067 927 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.51■□□□□ 0.07
Msh6P54276 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.51■□□□□ 0.07
Msh6P54276 Gm17831-201ENSMUST00000205579 900 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.51■□□□□ 0.07
Msh6P54276 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.51■□□□□ 0.07
Msh6P54276 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Gm9785-201ENSMUST00000062642 1006 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Msh6P54276 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.51■□□□□ 0.07
Msh6P54276 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh6P54276 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.51■□□□□ 0.07
Msh6P54276 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Msh6P54276 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Msh6P54276 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.5■□□□□ 0.07
Msh6P54276 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Msh6P54276 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Gm4034-201ENSMUST00000187674 480 ntBASIC15.5■□□□□ 0.07
Msh6P54276 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.5■□□□□ 0.07
Msh6P54276 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.5■□□□□ 0.07
Msh6P54276 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Msh6P54276 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.5■□□□□ 0.07
Msh6P54276 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Msh6P54276 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Msh6P54276 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh6P54276 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Msh6P54276 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.49■□□□□ 0.07
Msh6P54276 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Msh6P54276 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.49■□□□□ 0.07
Msh6P54276 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.49■□□□□ 0.07
Msh6P54276 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms