Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm12736-201ENSMUST00000119330 236 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lbx1P52955 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 Gm22388-201ENSMUST00000158194 248 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lbx1P52955 Gm8584-201ENSMUST00000171982 758 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.95□□□□□ -0.5
Lbx1P52955 Gm26957-201ENSMUST00000182645 977 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 Gm37782-201ENSMUST00000194879 678 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.95□□□□□ -0.5
Lbx1P52955 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.95□□□□□ -0.5
Lbx1P52955 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.95□□□□□ -0.5
Lbx1P52955 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lbx1P52955 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lbx1P52955 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.95□□□□□ -0.5
Lbx1P52955 Grk6-205ENSMUST00000224653 2976 ntBASIC11.95□□□□□ -0.5
Lbx1P52955 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lbx1P52955 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lbx1P52955 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.94□□□□□ -0.5
Lbx1P52955 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.94□□□□□ -0.5
Lbx1P52955 Gm11560-201ENSMUST00000117567 948 ntBASIC11.94□□□□□ -0.5
Lbx1P52955 Gm11957-201ENSMUST00000118304 779 ntBASIC11.94□□□□□ -0.5
Lbx1P52955 Gm16459-201ENSMUST00000121443 686 ntBASIC11.94□□□□□ -0.5
Lbx1P52955 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.94□□□□□ -0.5
Lbx1P52955 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.94□□□□□ -0.5
Lbx1P52955 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Gm3726-201ENSMUST00000203110 785 ntBASIC11.94□□□□□ -0.5
Lbx1P52955 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.94□□□□□ -0.5
Lbx1P52955 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.94□□□□□ -0.5
Lbx1P52955 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.94□□□□□ -0.5
Lbx1P52955 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lbx1P52955 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lbx1P52955 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lbx1P52955 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lbx1P52955 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lbx1P52955 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.93□□□□□ -0.5
Lbx1P52955 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms