Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx3P50481 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.45□□□□□ -0.42
Lhx3P50481 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lhx3P50481 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lhx3P50481 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx3P50481 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lhx3P50481 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lhx3P50481 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lhx3P50481 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm14017-201ENSMUST00000121934 386 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Gm24749-201ENSMUST00000157838 343 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm5616-201ENSMUST00000165252 384 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm8741-201ENSMUST00000174736 384 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Gm2260-201ENSMUST00000184965 657 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Gm29199-201ENSMUST00000187766 775 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Gm43962-201ENSMUST00000203898 190 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm45433-201ENSMUST00000209386 247 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.44□□□□□ -0.42
Lhx3P50481 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm5455-201ENSMUST00000058710 715 ntBASIC12.44□□□□□ -0.42
Lhx3P50481 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lhx3P50481 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx3P50481 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx3P50481 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx3P50481 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lhx3P50481 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Lhx3P50481 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lhx3P50481 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Lhx3P50481 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lhx3P50481 Gm12997-201ENSMUST00000120207 640 ntBASIC12.43□□□□□ -0.42
Lhx3P50481 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.43□□□□□ -0.42
Lhx3P50481 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lhx3P50481 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.43□□□□□ -0.42
Lhx3P50481 Gm27390-201ENSMUST00000184516 176 ntBASIC12.43□□□□□ -0.42
Lhx3P50481 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.43□□□□□ -0.42
Lhx3P50481 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.43□□□□□ -0.42
Lhx3P50481 Mir433-201ENSMUST00000093564 124 ntBASIC12.43□□□□□ -0.42
Lhx3P50481 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lhx3P50481 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx3P50481 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms