Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.92□□□□□ -0.5
TfamP40630 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.92□□□□□ -0.5
TfamP40630 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Gm8738-201ENSMUST00000172606 329 ntBASIC11.92□□□□□ -0.5
TfamP40630 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TfamP40630 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.92□□□□□ -0.5
TfamP40630 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TfamP40630 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
TfamP40630 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.92□□□□□ -0.5
TfamP40630 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.92□□□□□ -0.5
TfamP40630 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.92□□□□□ -0.5
TfamP40630 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TfamP40630 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TfamP40630 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TfamP40630 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.92□□□□□ -0.5
TfamP40630 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.91□□□□□ -0.5
TfamP40630 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TfamP40630 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TfamP40630 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.91□□□□□ -0.5
TfamP40630 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.91□□□□□ -0.5
TfamP40630 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Gm44405-201ENSMUST00000198952 126 ntBASIC11.91□□□□□ -0.5
TfamP40630 Gm6007-201ENSMUST00000208170 823 ntBASIC11.91□□□□□ -0.5
TfamP40630 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.91□□□□□ -0.5
TfamP40630 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.91□□□□□ -0.5
TfamP40630 Gm45930-201ENSMUST00000221330 292 ntBASIC11.91□□□□□ -0.5
TfamP40630 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TfamP40630 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TfamP40630 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TfamP40630 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.91□□□□□ -0.5
TfamP40630 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.91□□□□□ -0.5
TfamP40630 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.91□□□□□ -0.5
TfamP40630 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TfamP40630 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TfamP40630 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TfamP40630 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Map1b-203ENSMUST00000223725 2669 ntBASIC11.9□□□□□ -0.5
TfamP40630 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TfamP40630 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.9□□□□□ -0.5
TfamP40630 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.9□□□□□ -0.5
TfamP40630 Gm6222-202ENSMUST00000182143 629 ntBASIC11.9□□□□□ -0.5
TfamP40630 Gm18304-201ENSMUST00000189162 546 ntBASIC11.9□□□□□ -0.5
TfamP40630 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms