Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh4P39038 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cdh4P39038 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh4P39038 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdh4P39038 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh4P39038 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdh4P39038 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cdh4P39038 Gm23270-201ENSMUST00000104055 131 ntBASIC11.8□□□□□ -0.52
Cdh4P39038 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.8□□□□□ -0.52
Cdh4P39038 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh4P39038 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdh4P39038 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdh4P39038 Gm44958-201ENSMUST00000203734 736 ntBASIC11.8□□□□□ -0.52
Cdh4P39038 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdh4P39038 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdh4P39038 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh4P39038 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdh4P39038 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm11930-201ENSMUST00000117788 190 ntBASIC11.79□□□□□ -0.52
Cdh4P39038 Gm9083-201ENSMUST00000120423 819 ntBASIC11.79□□□□□ -0.52
Cdh4P39038 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm23119-201ENSMUST00000158610 140 ntBASIC11.79□□□□□ -0.52
Cdh4P39038 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Cdh4P39038 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm3096-201ENSMUST00000185770 364 ntBASIC11.79□□□□□ -0.52
Cdh4P39038 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh4P39038 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh4P39038 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.79□□□□□ -0.52
Cdh4P39038 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.79□□□□□ -0.52
Cdh4P39038 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdh4P39038 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Cdh4P39038 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.79□□□□□ -0.52
Cdh4P39038 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.79□□□□□ -0.52
Cdh4P39038 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdh4P39038 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh4P39038 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms