Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.09□□□□□ -0.15
Vcam1P29533 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm19459-201ENSMUST00000176240 835 ntBASIC14.09□□□□□ -0.15
Vcam1P29533 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.09□□□□□ -0.15
Vcam1P29533 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.09□□□□□ -0.15
Vcam1P29533 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.09□□□□□ -0.15
Vcam1P29533 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vcam1P29533 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Vcam1P29533 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.09□□□□□ -0.15
Vcam1P29533 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.09□□□□□ -0.15
Vcam1P29533 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.08□□□□□ -0.15
Vcam1P29533 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vcam1P29533 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.08□□□□□ -0.16
Vcam1P29533 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.08□□□□□ -0.16
Vcam1P29533 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm11663-201ENSMUST00000117888 290 ntBASIC14.08□□□□□ -0.16
Vcam1P29533 Gm15131-201ENSMUST00000119124 595 ntBASIC14.08□□□□□ -0.16
Vcam1P29533 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vcam1P29533 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.08□□□□□ -0.16
Vcam1P29533 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.08□□□□□ -0.16
Vcam1P29533 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.08□□□□□ -0.16
Vcam1P29533 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.08□□□□□ -0.16
Vcam1P29533 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.08□□□□□ -0.16
Vcam1P29533 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vcam1P29533 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcam1P29533 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Vcam1P29533 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vcam1P29533 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Vcam1P29533 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Vcam1P29533 Gm17391-201ENSMUST00000171036 126 ntBASIC14.07□□□□□ -0.16
Vcam1P29533 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Gm4310-201ENSMUST00000177847 889 ntBASIC14.07□□□□□ -0.16
Vcam1P29533 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.07□□□□□ -0.16
Vcam1P29533 Gm43916-201ENSMUST00000205062 967 ntBASIC14.07□□□□□ -0.16
Vcam1P29533 Gm17931-201ENSMUST00000208132 634 ntBASIC14.07□□□□□ -0.16
Vcam1P29533 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.07□□□□□ -0.16
Vcam1P29533 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Gm10179-201ENSMUST00000086233 688 ntBASIC14.07□□□□□ -0.16
Vcam1P29533 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms