Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.29□□□□□ -0.44
Nckap1P28660 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 AY036118-201ENSMUST00000200021 923 ntBASIC12.29□□□□□ -0.44
Nckap1P28660 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nckap1P28660 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.29□□□□□ -0.44
Nckap1P28660 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Nckap1P28660 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nckap1P28660 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Nckap1P28660 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Gm23200-201ENSMUST00000104379 132 ntBASIC12.28□□□□□ -0.44
Nckap1P28660 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Gm11989-201ENSMUST00000117240 672 ntBASIC12.28□□□□□ -0.44
Nckap1P28660 Gm11362-201ENSMUST00000118838 850 ntBASIC12.28□□□□□ -0.44
Nckap1P28660 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Nckap1P28660 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.28□□□□□ -0.44
Nckap1P28660 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Gm25732-201ENSMUST00000175168 60 ntBASIC12.28□□□□□ -0.44
Nckap1P28660 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.28□□□□□ -0.44
Nckap1P28660 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nckap1P28660 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.28□□□□□ -0.44
Nckap1P28660 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nckap1P28660 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nckap1P28660 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.27□□□□□ -0.44
Nckap1P28660 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nckap1P28660 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nckap1P28660 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nckap1P28660 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.27□□□□□ -0.45
Nckap1P28660 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.27□□□□□ -0.45
Nckap1P28660 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.27□□□□□ -0.45
Nckap1P28660 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.27□□□□□ -0.45
Nckap1P28660 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.27□□□□□ -0.45
Nckap1P28660 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Nckap1P28660 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.27□□□□□ -0.45
Nckap1P28660 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms