Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.82□□□□□ -0.36
H2afxP27661 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afxP27661 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afxP27661 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afxP27661 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H2afxP27661 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afxP27661 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
H2afxP27661 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.81□□□□□ -0.36
H2afxP27661 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.81□□□□□ -0.36
H2afxP27661 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.81□□□□□ -0.36
H2afxP27661 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.81□□□□□ -0.36
H2afxP27661 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
H2afxP27661 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Gm25911-201ENSMUST00000157621 56 ntBASIC12.81□□□□□ -0.36
H2afxP27661 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.81□□□□□ -0.36
H2afxP27661 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
H2afxP27661 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.81□□□□□ -0.36
H2afxP27661 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afxP27661 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afxP27661 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afxP27661 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afxP27661 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
H2afxP27661 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Gm5687-201ENSMUST00000118252 640 ntBASIC12.8□□□□□ -0.36
H2afxP27661 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Gm23363-201ENSMUST00000175024 79 ntBASIC12.8□□□□□ -0.36
H2afxP27661 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.8□□□□□ -0.36
H2afxP27661 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afxP27661 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afxP27661 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H2afxP27661 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.8□□□□□ -0.36
H2afxP27661 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afxP27661 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.79□□□□□ -0.36
H2afxP27661 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms