Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Gm9996-201ENSMUST00000070359 913 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Col8a2P25318 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Col8a2P25318 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.26□□□□□ -0.77
Col8a2P25318 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Col8a2P25318 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Gm24934-201ENSMUST00000103764 111 ntBASIC10.26□□□□□ -0.77
Col8a2P25318 Gm14130-201ENSMUST00000118417 987 ntBASIC10.26□□□□□ -0.77
Col8a2P25318 Gm13996-201ENSMUST00000118456 430 ntBASIC10.26□□□□□ -0.77
Col8a2P25318 Gm14017-201ENSMUST00000121934 386 ntBASIC10.26□□□□□ -0.77
Col8a2P25318 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.26□□□□□ -0.77
Col8a2P25318 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.26□□□□□ -0.77
Col8a2P25318 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.26□□□□□ -0.77
Col8a2P25318 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Col8a2P25318 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Col8a2P25318 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Matn2-203ENSMUST00000226766 3252 ntBASIC10.26□□□□□ -0.77
Col8a2P25318 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.26□□□□□ -0.77
Col8a2P25318 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.26□□□□□ -0.77
Col8a2P25318 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Col8a2P25318 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col8a2P25318 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms