Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.71□□□□□ -0.37
Hoxd8P23463 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.71□□□□□ -0.38
Hoxd8P23463 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hoxd8P23463 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Hoxd8P23463 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.71□□□□□ -0.38
Hoxd8P23463 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.71□□□□□ -0.38
Hoxd8P23463 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hoxd8P23463 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxd8P23463 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.71□□□□□ -0.38
Hoxd8P23463 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.71□□□□□ -0.38
Hoxd8P23463 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Gm14201-201ENSMUST00000117627 289 ntBASIC12.7□□□□□ -0.38
Hoxd8P23463 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.7□□□□□ -0.38
Hoxd8P23463 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.7□□□□□ -0.38
Hoxd8P23463 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Gm44551-201ENSMUST00000208804 171 ntBASIC12.7□□□□□ -0.38
Hoxd8P23463 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.7□□□□□ -0.38
Hoxd8P23463 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.7□□□□□ -0.38
Hoxd8P23463 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxd8P23463 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxd8P23463 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.69□□□□□ -0.38
Hoxd8P23463 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxd8P23463 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm17889-201ENSMUST00000198410 598 ntBASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.69□□□□□ -0.38
Hoxd8P23463 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.69□□□□□ -0.38
Hoxd8P23463 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxd8P23463 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms