Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gm24420-201ENSMUST00000176676 59 ntBASIC11.21□□□□□ -0.61
Cbx3P23198 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cbx3P23198 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.21□□□□□ -0.61
Cbx3P23198 Gm37935-201ENSMUST00000192012 982 ntBASIC11.21□□□□□ -0.61
Cbx3P23198 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cbx3P23198 Shd-206ENSMUST00000225145 998 ntBASIC11.21□□□□□ -0.61
Cbx3P23198 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cbx3P23198 Gm8396-201ENSMUST00000057361 823 ntBASIC11.21□□□□□ -0.61
Cbx3P23198 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cbx3P23198 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cbx3P23198 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cbx3P23198 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.21□□□□□ -0.62
Cbx3P23198 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cbx3P23198 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cbx3P23198 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.2□□□□□ -0.62
Cbx3P23198 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.2□□□□□ -0.62
Cbx3P23198 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.2□□□□□ -0.62
Cbx3P23198 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.2□□□□□ -0.62
Cbx3P23198 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Gm8927-201ENSMUST00000181978 981 ntBASIC11.2□□□□□ -0.62
Cbx3P23198 Gm27533-201ENSMUST00000183800 152 ntBASIC11.2□□□□□ -0.62
Cbx3P23198 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.2□□□□□ -0.62
Cbx3P23198 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cbx3P23198 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Gm3222-201ENSMUST00000071282 990 ntBASIC11.2□□□□□ -0.62
Cbx3P23198 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cbx3P23198 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Cbx3P23198 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cbx3P23198 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cbx3P23198 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.19□□□□□ -0.62
Cbx3P23198 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Cbx3P23198 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.19□□□□□ -0.62
Cbx3P23198 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Cbx3P23198 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.19□□□□□ -0.62
Cbx3P23198 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.19□□□□□ -0.62
Cbx3P23198 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.19□□□□□ -0.62
Cbx3P23198 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.19□□□□□ -0.62
Cbx3P23198 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Gm15770-201ENSMUST00000117498 584 ntBASIC11.19□□□□□ -0.62
Cbx3P23198 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.19□□□□□ -0.62
Cbx3P23198 Gm13385-201ENSMUST00000121089 220 ntBASIC11.19□□□□□ -0.62
Cbx3P23198 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cbx3P23198 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Cbx3P23198 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms