Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccl1P10146 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccl1P10146 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccl1P10146 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.51□□□□□ -0.89
Ccl1P10146 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ccl1P10146 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccl1P10146 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ccl1P10146 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl1P10146 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.5□□□□□ -0.89
Ccl1P10146 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Ccl1P10146 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.5□□□□□ -0.89
Ccl1P10146 Gm14921-201ENSMUST00000118643 908 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Ccl1P10146 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.5□□□□□ -0.89
Ccl1P10146 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.5□□□□□ -0.89
Ccl1P10146 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.5□□□□□ -0.89
Ccl1P10146 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ccl1P10146 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ccl1P10146 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Ccl1P10146 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.5□□□□□ -0.89
Ccl1P10146 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Ccl1P10146 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl1P10146 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ccl1P10146 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ccl1P10146 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ccl1P10146 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.49□□□□□ -0.89
Ccl1P10146 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ccl1P10146 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ccl1P10146 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms